Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | N824_17855 | Not Available | - | 1511072 - 1511755 | 25278.8 |
| hypothetical protein | N824_17860 | Not Available | - | 1511758 - 1511961 | 7761.65 |
| hypothetical protein | N824_17865 | Not Available | - | 1512010 - 1513929 | 69872.2 |
| hypothetical protein | N824_17870 | Not Available | + | 1514782 - 1517943 | 116245.0 |
| hypothetical protein | N824_17875 | Not Available | + | 1517983 - 1519515 | 57745.8 |
| hypothetical protein | N824_17880 | Not Available | + | 1519539 - 1519913 | 13418.3 |
| hypothetical protein | N824_17885 | Not Available | + | 1520017 - 1520199 | 6989.32 |
| hypothetical protein | N824_17890 | Not Available | + | 1520227 - 1521213 | 36738.2 |
| acyl-coa reductase | N824_17895 | Not Available | - | 1521285 - 1522304 | 38589.2 |
| ferredoxin | N824_17900 | Not Available | + | 1522382 - 1522732 | 12772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.