Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein | N824_17805 | Not Available | + | 1502629 - 1505100 | 92718.4 |
| hypothetical protein | N824_17810 | Not Available | + | 1505100 - 1505861 | 27828.8 |
| ferredoxin | N824_17815 | Not Available | + | 1505902 - 1506234 | 12177.6 |
| fes assembly protein iscx | N824_17820 | Not Available | + | 1506262 - 1506504 | 9816.23 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | N824_17825 | Not Available | + | 1506511 - 1507038 | 19135.1 |
| hypothetical protein | N824_17830 | Not Available | + | 1507155 - 1507556 | 14780.7 |
| septum formation protein maf | N824_17835 | Not Available | + | 1507625 - 1508194 | 20518.5 |
| hypothetical protein | N824_17840 | Not Available | - | 1508183 - 1509082 | 32732.8 |
| molecular chaperone dnaj | N824_17845 | Not Available | - | 1509175 - 1510338 | 41534.3 |
| hypothetical protein | N824_17850 | Not Available | - | 1510343 - 1510942 | 22413.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.