Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17750 | Not Available | + | 1496480 - 1496758 | 10347.5 |
| gliding motility protein gldc | N824_17755 | Not Available | + | 1496758 - 1497093 | 12939.4 |
| hypothetical protein | N824_17760 | Not Available | + | 1497159 - 1497512 | 12968.5 |
| membrane protein | N824_17765 | Not Available | - | 1497517 - 1498032 | 19370.9 |
| abc transporter permease | N824_17775 | Not Available | + | 1498092 - 1498796 | 24231.9 |
| abc transporter permease | N824_17780 | Not Available | + | 1498849 - 1499508 | 25190.1 |
| hypothetical protein | N824_17785 | Not Available | + | 1499510 - 1499728 | 8145.44 |
| glutamate dehydrogenase | N824_17790 | Not Available | + | 1499878 - 1501299 | 51737.0 |
| hypothetical protein | N824_17795 | Not Available | + | 1501429 - 1502088 | 24965.0 |
| cytochrome c biogenesis protein | N824_17800 | Not Available | + | 1502213 - 1502623 | 15550.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.