Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17650 | Not Available | + | 1474138 - 1475256 | 42336.2 |
| 2-oxoglutarate translocator | N824_17655 | Not Available | + | 1475286 - 1476716 | 51830.2 |
| succinate dehydrogenase | N824_17660 | Not Available | + | 1476727 - 1477410 | 26171.4 |
| succinate dehydrogenase | N824_17665 | Not Available | + | 1477401 - 1479317 | 71114.6 |
| succinate dehydrogenase | N824_17670 | Not Available | + | 1479326 - 1480072 | 27531.2 |
| glycyl-trna synthetease | N824_17675 | Not Available | - | 1480147 - 1481628 | 57450.4 |
| multidrug abc transporter atpase | N824_17680 | Not Available | + | 1481734 - 1482441 | 26347.0 |
| hypothetical protein | N824_17685 | Not Available | + | 1482561 - 1483082 | 17900.3 |
| hypothetical protein | N824_17690 | Not Available | - | 1483083 - 1483220 | 5305.45 |
| hypothetical protein | N824_17695 | Not Available | + | 1483511 - 1484032 | 18616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.