Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine 4-monooxygenase | N824_17600 | Not Available | - | 1459149 - 1460936 | 66898.5 |
| hypothetical protein | N824_17605 | Not Available | - | 1461022 - 1461423 | 15022.7 |
| sulfatase | N824_17610 | Not Available | - | 1461509 - 1463437 | 73238.5 |
| hypothetical protein | N824_17615 | Not Available | - | 1463536 - 1464057 | 19866.7 |
| hypothetical protein | N824_17620 | Not Available | + | 1464576 - 1465118 | 20888.2 |
| hypothetical protein | N824_17625 | Not Available | + | 1465173 - 1466087 | 34084.2 |
| hypothetical protein | N824_17630 | Not Available | + | 1466219 - 1467613 | 50460.7 |
| hypothetical protein | N824_17635 | Not Available | + | 1468214 - 1469662 | 54267.4 |
| hypothetical protein | N824_17640 | Not Available | + | 1469680 - 1471479 | 67197.8 |
| hypothetical protein | N824_17645 | Not Available | + | 1471490 - 1473934 | 90320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.