Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17500 | Not Available | - | 1440280 - 1441122 | 31621.2 |
| 6-phosphofructokinase | N824_17505 | Not Available | - | 1441125 - 1442111 | 35256.5 |
| nudix hydrolase | N824_17510 | Not Available | + | 1442582 - 1443223 | 25048.4 |
| n-acetylglucosamine kinase | N824_17515 | Not Available | - | 1443306 - 1444163 | 32165.0 |
| threonine aldolase | N824_17520 | Not Available | + | 1444597 - 1445637 | 37426.3 |
| acetyl-coa carboxylase | N824_17525 | Not Available | + | 1445647 - 1447131 | 54813.1 |
| riboflavin synthase subunit alpha | N824_17530 | Not Available | + | 1447137 - 1447721 | 21427.5 |
| hypothetical protein | N824_17535 | Not Available | - | 1447723 - 1448868 | 43398.2 |
| hypothetical protein | N824_17540 | Not Available | + | 1449050 - 1449349 | 11368.5 |
| hypothetical protein | N824_17545 | Not Available | - | 1449385 - 1449984 | 22421.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.