Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17450 | Not Available | + | 1428241 - 1431228 | 114572.0 |
| hypothetical protein | N824_17455 | Not Available | + | 1431369 - 1432115 | 28457.4 |
| hypothetical protein | N824_17460 | Not Available | - | 1432131 - 1433918 | 66576.1 |
| hypothetical protein | N824_17465 | Not Available | + | 1434068 - 1434703 | 24150.9 |
| hypothetical protein | N824_17470 | Not Available | - | 1434725 - 1436869 | 80645.6 |
| hypothetical protein | N824_17475 | Not Available | - | 1436962 - 1437771 | 30273.1 |
| hypothetical protein | N824_17480 | Not Available | + | 1437872 - 1438318 | 16814.8 |
| hypothetical protein | N824_17485 | Not Available | + | 1438329 - 1438826 | 19420.5 |
| hypothetical protein | N824_17490 | Not Available | + | 1438823 - 1439176 | 13487.0 |
| glyceraldehyde-3-phosphate dehydrogenase | N824_17495 | Not Available | - | 1439277 - 1440275 | 35669.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.