Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17400 | Not Available | + | 1416033 - 1417619 | 60525.9 |
| hypothetical protein | N824_17405 | Not Available | + | 1417656 - 1418282 | 23798.3 |
| hypothetical protein | N824_17410 | Not Available | + | 1418292 - 1418759 | 17572.2 |
| transcriptional regulator | N824_17415 | Not Available | + | 1418789 - 1419220 | 16310.8 |
| cation-transporting atpase | N824_17420 | Not Available | + | 1419266 - 1421257 | 71213.8 |
| hypothetical protein | N824_17425 | Not Available | - | 1421247 - 1421366 | 4303.52 |
| hypothetical protein | N824_17430 | Not Available | + | 1421531 - 1424269 | 103200.0 |
| sulfatase | N824_17435 | Not Available | + | 1424275 - 1425783 | 55312.1 |
| hypothetical protein | N824_17440 | Not Available | + | 1425819 - 1426757 | 34588.4 |
| hypothetical protein | N824_17445 | Not Available | + | 1426761 - 1428170 | 51014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.