Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosyl-trna synthetase | N824_17350 | Not Available | + | 1400545 - 1401831 | 47923.1 |
| acyl transferase | N824_17355 | Not Available | - | 1401840 - 1402823 | 37330.5 |
| hypothetical protein | N824_17360 | Not Available | - | 1402853 - 1403203 | 12729.4 |
| penicillin acylase | N824_17365 | Not Available | - | 1403208 - 1405646 | 92060.7 |
| hypothetical protein | N824_17370 | Not Available | + | 1405860 - 1408760 | 105410.0 |
| glycosyl hydrolase | N824_17375 | Not Available | + | 1408964 - 1411420 | 95446.2 |
| glycogen branching protein | N824_17380 | Not Available | + | 1411420 - 1413327 | 73311.0 |
| hypothetical protein | N824_17385 | Not Available | + | 1413359 - 1413898 | 20241.2 |
| hypothetical protein | N824_17390 | Not Available | + | 1414199 - 1415020 | 31054.2 |
| hypothetical protein | N824_17395 | Not Available | + | 1415026 - 1415952 | 34755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.