Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--alanine ligase | N824_17300 | Not Available | + | 1389421 - 1390776 | 49913.9 |
| hypothetical protein | N824_17305 | Not Available | + | 1390769 - 1391647 | 33422.8 |
| cell division protein ftsa | N824_17310 | Not Available | + | 1391699 - 1393057 | 49461.1 |
| cell division protein ftsz | N824_17315 | Not Available | + | 1393187 - 1394821 | 59725.7 |
| hypothetical protein | N824_17320 | Not Available | - | 1394818 - 1394931 | 4656.51 |
| 8-amino-7-oxononanoate synthase | N824_17325 | Not Available | + | 1394981 - 1396222 | 46195.9 |
| histone h1-like protein | N824_17330 | Not Available | + | 1396481 - 1396657 | 6525.87 |
| dihydrodipicolinate synthase | N824_17335 | Not Available | - | 1396778 - 1397659 | 31636.2 |
| dna ligase | N824_17340 | Not Available | - | 1397670 - 1399682 | 75949.9 |
| hypothetical protein | N824_17345 | Not Available | - | 1399754 - 1400440 | 26218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.