Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17195 | Not Available | - | 1364187 - 1365203 | 38926.4 |
| hypothetical protein | N824_17200 | Not Available | + | 1365430 - 1368513 | 112896.0 |
| hypothetical protein | N824_17205 | Not Available | + | 1368532 - 1370190 | 62889.0 |
| hypothetical protein | N824_17210 | Not Available | + | 1370195 - 1372183 | 73804.7 |
| hypothetical protein | N824_17215 | Not Available | + | 1372188 - 1373567 | 52201.0 |
| hypothetical protein | N824_17220 | Not Available | - | 1373564 - 1373932 | 14065.3 |
| hypothetical protein | N824_17225 | Not Available | + | 1374088 - 1374639 | 20553.8 |
| glyoxalase | N824_17230 | Not Available | + | 1374712 - 1375185 | 17764.1 |
| glyceraldehyde-3-phosphate dehydrogenase | N824_17240 | Not Available | + | 1376703 - 1377698 | 35786.0 |
| phosphoglycerate kinase | N824_17245 | Not Available | + | 1377786 - 1378979 | 42316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.