Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17145 | Not Available | + | 1347424 - 1347798 | 13693.6 |
| acriflavine resistance protein b | N824_17150 | Not Available | + | 1347894 - 1352279 | 159735.0 |
| hypothetical protein | N824_17155 | Not Available | + | 1352288 - 1353475 | 43001.3 |
| hypothetical protein | N824_17160 | Not Available | - | 1353525 - 1357163 | 136695.0 |
| hypothetical protein | N824_17165 | Not Available | - | 1357227 - 1358645 | 51705.4 |
| xre family transcriptional regulator | N824_17170 | Not Available | - | 1358728 - 1359747 | 38268.3 |
| activator of hsp90 atpase | N824_17175 | Not Available | + | 1359897 - 1360355 | 17141.3 |
| hypothetical protein | N824_17180 | Not Available | - | 1360352 - 1361851 | 56304.7 |
| hypothetical protein | N824_17185 | Not Available | + | 1361992 - 1362576 | 22407.0 |
| hypothetical protein | N824_17190 | Not Available | - | 1362579 - 1364177 | 58123.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.