Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein susd | N824_17095 | Not Available | + | 1336965 - 1338434 | 54204.4 |
| n-acetylneuraminate lyase | N824_17100 | Not Available | + | 1338456 - 1339394 | 34679.9 |
| hypothetical protein | N824_17105 | Not Available | + | 1339405 - 1340571 | 43279.4 |
| n-acetylneuraminate lyase | N824_17110 | Not Available | + | 1340597 - 1341511 | 33054.3 |
| hypothetical protein | N824_17115 | Not Available | + | 1341547 - 1342572 | 36090.1 |
| hypothetical protein | N824_17120 | Not Available | + | 1342569 - 1343525 | 34688.7 |
| hypothetical protein | N824_17125 | Not Available | + | 1343467 - 1343808 | 11602.6 |
| hypothetical protein | N824_17130 | Not Available | + | 1343801 - 1345219 | 52457.4 |
| hypothetical protein | N824_17135 | Not Available | - | 1345228 - 1345764 | 19833.1 |
| hypothetical protein | N824_17140 | Not Available | - | 1345833 - 1347329 | 56193.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.