Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_17045 | Not Available | + | 1325316 - 1326080 | 28417.7 |
| oxidoreductase | N824_17050 | Not Available | + | 1326113 - 1327228 | 41491.2 |
| hypothetical protein | N824_17055 | Not Available | + | 1327288 - 1327665 | 13133.1 |
| hypothetical protein | N824_17060 | Not Available | - | 1327717 - 1328133 | 15661.0 |
| hypothetical protein | N824_17065 | Not Available | - | 1328452 - 1329693 | 45270.9 |
| hypothetical protein | N824_17070 | Not Available | - | 1329680 - 1330207 | 19871.5 |
| hypothetical protein | N824_17075 | Not Available | + | 1330472 - 1331311 | 30348.1 |
| gntr family transcriptional regulator | N824_17080 | Not Available | + | 1331404 - 1332090 | 26091.5 |
| glycoside hydrolase | N824_17085 | Not Available | + | 1332236 - 1333507 | 46378.2 |
| tonb-denpendent receptor | N824_17090 | Not Available | + | 1333627 - 1336953 | 121330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.