Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16995 | Not Available | + | 1310977 - 1312317 | 46840.7 |
| hypothetical protein | N824_17000 | Not Available | + | 1312402 - 1313973 | 56641.8 |
| adenylate kinase | N824_17005 | Not Available | + | 1314311 - 1314880 | 21088.2 |
| gtpase cgta | N824_17010 | Not Available | + | 1314984 - 1315982 | 35958.3 |
| mfs transporter | N824_17015 | Not Available | - | 1315979 - 1317211 | 44401.4 |
| peptidase c39 | N824_17020 | Not Available | - | 1317271 - 1319463 | 81900.4 |
| secretion protein hlyd | N824_17025 | Not Available | - | 1319444 - 1320616 | 44267.2 |
| hypothetical protein | N824_17030 | Not Available | - | 1320680 - 1320886 | 7138.73 |
| hypothetical protein | N824_17035 | Not Available | - | 1321172 - 1322047 | 33829.1 |
| hypothetical protein | N824_17040 | Not Available | + | 1322169 - 1325195 | 111798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.