Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16895 | Not Available | - | 1289333 - 1289959 | 24371.5 |
| hypothetical protein | N824_16900 | Not Available | + | 1290311 - 1290724 | 15936.5 |
| hypothetical protein | N824_16905 | Not Available | + | 1290709 - 1291944 | 45634.1 |
| hypothetical protein | N824_16910 | Not Available | + | 1291954 - 1293945 | 74907.0 |
| hypothetical protein | N824_16915 | Not Available | - | 1294013 - 1294489 | 17275.2 |
| hypothetical protein | N824_16920 | Not Available | - | 1294491 - 1294910 | 15207.3 |
| hypothetical protein | N824_16925 | Not Available | - | 1294982 - 1295551 | 22192.7 |
| hypothetical protein | N824_16930 | Not Available | + | 1295831 - 1296172 | 13146.9 |
| ionic transporter y4ha | N824_16935 | Not Available | - | 1296533 - 1297615 | 37755.9 |
| hypothetical protein | N824_16940 | Not Available | + | 1297802 - 1297981 | 5494.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.