Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna modification/repair radical sam protein | N824_16845 | Not Available | + | 1277067 - 1278323 | 47850.0 |
| dna metabolism protein | N824_16850 | Not Available | + | 1278337 - 1279101 | 30245.1 |
| hypothetical protein | N824_16855 | Not Available | + | 1279742 - 1280308 | 20835.5 |
| hypothetical protein | N824_16860 | Not Available | + | 1280761 - 1281288 | 20698.1 |
| hypothetical protein | N824_16865 | Not Available | + | 1281285 - 1282016 | 27568.2 |
| hypothetical protein | N824_16870 | Not Available | + | 1282065 - 1282934 | 30826.0 |
| hypothetical protein | N824_16875 | Not Available | + | 1282973 - 1285180 | 81133.8 |
| cyclase | N824_16880 | Not Available | - | 1285737 - 1286471 | 27433.6 |
| hypothetical protein | N824_16885 | Not Available | - | 1286819 - 1287184 | 14018.8 |
| hypothetical protein | N824_16890 | Not Available | + | 1288081 - 1288965 | 33492.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.