Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16795 | Not Available | + | 1270873 - 1271337 | 16910.4 |
| hypothetical protein | N824_16800 | Not Available | - | 1271401 - 1271589 | 7226.32 |
| hypothetical protein | N824_16805 | Not Available | + | 1271753 - 1271905 | 5211.43 |
| hypothetical protein | N824_16810 | Not Available | - | 1271957 - 1272325 | 13719.6 |
| hypothetical protein | N824_16815 | Not Available | - | 1272635 - 1273042 | 15380.1 |
| hypothetical protein | N824_16820 | Not Available | + | 1273248 - 1273823 | 22733.5 |
| hypothetical protein | N824_16825 | Not Available | + | 1273888 - 1274337 | 17254.8 |
| hypothetical protein | N824_16830 | Not Available | + | 1274349 - 1274999 | 24281.6 |
| hypothetical protein | N824_16835 | Not Available | + | 1275256 - 1275789 | 19151.1 |
| hypothetical protein | N824_16840 | Not Available | - | 1276328 - 1276858 | 20166.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.