Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | N824_16745 | Not Available | - | 1264926 - 1265660 | 28120.2 |
| hypothetical protein | N824_16750 | Not Available | + | 1265804 - 1266085 | 10338.1 |
| hypothetical protein | N824_16755 | Not Available | + | 1266153 - 1266608 | 16786.8 |
| hypothetical protein | N824_16760 | Not Available | + | 1266631 - 1266873 | 8858.1 |
| hypothetical protein | N824_16765 | Not Available | + | 1266878 - 1267579 | 25431.3 |
| hypothetical protein | N824_16770 | Not Available | + | 1267590 - 1268369 | 28930.4 |
| oxidoreductase | N824_16775 | Not Available | + | 1268602 - 1269498 | 31874.7 |
| hypothetical protein | N824_16780 | Not Available | + | 1269572 - 1269865 | 11033.9 |
| hypothetical protein | N824_16785 | Not Available | + | 1269887 - 1270315 | 16715.6 |
| hypothetical protein | N824_16790 | Not Available | + | 1270536 - 1270631 | 3366.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.