Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16695 | Not Available | - | 1260382 - 1260531 | 5700.99 |
| hypothetical protein | N824_16700 | Not Available | + | 1260642 - 1261130 | 18890.8 |
| hypothetical protein | N824_16705 | Not Available | + | 1261167 - 1261448 | 10840.1 |
| hypothetical protein | N824_16710 | Not Available | - | 1261702 - 1262256 | 20339.0 |
| hypothetical protein | N824_16715 | Not Available | + | 1262406 - 1262543 | 5346.62 |
| hypothetical protein | N824_16720 | Not Available | + | 1262533 - 1263141 | 21696.2 |
| hypothetical protein | N824_16725 | Not Available | + | 1263143 - 1263943 | 29915.5 |
| hypothetical protein | N824_16730 | Not Available | + | 1264172 - 1264441 | 9802.82 |
| hypothetical protein | N824_16735 | Not Available | + | 1264458 - 1264652 | 6877.34 |
| hypothetical protein | N824_16740 | Not Available | + | 1264657 - 1264914 | 9758.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.