Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16645 | Not Available | + | 1248664 - 1248897 | 8170.74 |
| hypothetical protein | N824_16650 | Not Available | + | 1248952 - 1250001 | 40397.2 |
| hypothetical protein | N824_16655 | Not Available | - | 1249961 - 1251508 | 58493.0 |
| hypothetical protein | N824_16660 | Not Available | - | 1251583 - 1252956 | 51609.8 |
| hypothetical protein | N824_16665 | Not Available | - | 1252967 - 1255978 | 111209.0 |
| hypothetical protein | N824_16670 | Not Available | + | 1256539 - 1256820 | 10996.8 |
| hypothetical protein | N824_16675 | Not Available | - | 1257101 - 1257517 | 16398.2 |
| hypothetical protein | N824_16680 | Not Available | + | 1257596 - 1257886 | 10616.6 |
| hypothetical protein | N824_16685 | Not Available | - | 1258095 - 1259240 | 39783.3 |
| glycerate dehydrogenase | N824_16690 | Not Available | - | 1259252 - 1260211 | 34622.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.