Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16595 | Not Available | + | 1238654 - 1240240 | 59035.6 |
| hypothetical protein | N824_16600 | Not Available | + | 1240343 - 1240564 | 8329.15 |
| hypothetical protein | N824_16605 | Not Available | + | 1240774 - 1243638 | 109527.0 |
| hypothetical protein | N824_16610 | Not Available | - | 1243651 - 1244376 | 26785.5 |
| hypothetical protein | N824_16615 | Not Available | - | 1244373 - 1245443 | 40943.0 |
| hypothetical protein | N824_16620 | Not Available | + | 1245512 - 1245724 | 8005.47 |
| hypothetical protein | N824_16625 | Not Available | + | 1245954 - 1246352 | 15402.1 |
| hypothetical protein | N824_16630 | Not Available | + | 1246461 - 1247372 | 35311.3 |
| hypothetical protein | N824_16635 | Not Available | + | 1247369 - 1247962 | 23300.6 |
| hypothetical protein | N824_16640 | Not Available | + | 1248276 - 1248572 | 10710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.