Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16495 | Not Available | + | 1217601 - 1218128 | 19175.4 |
| hypothetical protein | N824_16500 | Not Available | + | 1218192 - 1218773 | 21520.1 |
| hypothetical protein | N824_16505 | Not Available | + | 1218845 - 1219669 | 29810.5 |
| hypothetical protein | N824_16510 | Not Available | + | 1219682 - 1220902 | 44462.7 |
| hypothetical protein | N824_16515 | Not Available | - | 1220935 - 1222398 | 55084.3 |
| hypothetical protein | N824_16520 | Not Available | + | 1222476 - 1223117 | 24140.0 |
| hypothetical protein | N824_16525 | Not Available | + | 1223117 - 1224001 | 32008.0 |
| hypothetical protein | N824_16530 | Not Available | - | 1224053 - 1224487 | 16373.8 |
| hypothetical protein | N824_16535 | Not Available | + | 1224703 - 1225551 | 30461.1 |
| hypothetical protein | N824_16540 | Not Available | + | 1225603 - 1226508 | 34991.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.