Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16395 | Not Available | + | 1196964 - 1197344 | 14766.1 |
| hypothetical protein | N824_16400 | Not Available | + | 1197362 - 1198381 | 39387.0 |
| hypothetical protein | N824_16405 | Not Available | + | 1198362 - 1199123 | 29022.1 |
| hypothetical protein | N824_16410 | Not Available | + | 1199246 - 1200016 | 28256.8 |
| hypothetical protein | N824_16415 | Not Available | + | 1200081 - 1200470 | 14476.2 |
| hypothetical protein | N824_16420 | Not Available | + | 1200602 - 1201645 | 35900.7 |
| hypothetical protein | N824_16425 | Not Available | - | 1201658 - 1202788 | 43037.0 |
| hypothetical protein | N824_16430 | Not Available | - | 1202893 - 1205319 | 88675.7 |
| hypothetical protein | N824_16435 | Not Available | + | 1205490 - 1207844 | 87877.7 |
| hypothetical protein | N824_16440 | Not Available | + | 1207895 - 1208341 | 17352.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.