Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16345 | Not Available | + | 1190646 - 1190939 | 11215.9 |
| hypothetical protein | N824_16350 | Not Available | + | 1191002 - 1192036 | 38400.9 |
| hypothetical protein | N824_16355 | Not Available | + | 1192132 - 1192701 | 21030.5 |
| hypothetical protein | N824_16360 | Not Available | + | 1192750 - 1193130 | 14615.9 |
| hypothetical protein | N824_16365 | Not Available | - | 1193110 - 1193649 | 20870.4 |
| hypothetical protein | N824_16370 | Not Available | - | 1193679 - 1194017 | 13194.3 |
| hypothetical protein | N824_16375 | Not Available | + | 1194171 - 1194356 | 6777.34 |
| hypothetical protein | N824_16380 | Not Available | + | 1194490 - 1195536 | 38315.7 |
| hypothetical protein | N824_16385 | Not Available | + | 1195578 - 1196030 | 15507.3 |
| hypothetical protein | N824_16390 | Not Available | + | 1196177 - 1196917 | 25857.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.