Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16295 | Not Available | - | 1179039 - 1180508 | 55887.8 |
| hypothetical protein | N824_16300 | Not Available | + | 1180698 - 1181063 | 14246.6 |
| hypothetical protein | N824_16305 | Not Available | + | 1181240 - 1182484 | 45588.5 |
| hypothetical protein | N824_16310 | Not Available | + | 1182545 - 1183960 | 53182.7 |
| hypothetical protein | N824_16315 | Not Available | + | 1184177 - 1184845 | 24572.1 |
| hypothetical protein | N824_16320 | Not Available | + | 1184826 - 1186115 | 47717.6 |
| hypothetical protein | N824_16325 | Not Available | + | 1186112 - 1187266 | 43403.7 |
| hypothetical protein | N824_16330 | Not Available | + | 1187286 - 1188662 | 51522.5 |
| hypothetical protein | N824_16335 | Not Available | + | 1188646 - 1189941 | 48444.6 |
| hypothetical protein | N824_16340 | Not Available | - | 1190089 - 1190400 | 11224.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.