Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16245 | Not Available | + | 1172473 - 1173114 | 23033.2 |
| hypothetical protein | N824_16250 | Not Available | - | 1173211 - 1173486 | 10943.4 |
| hypothetical protein | N824_16255 | Not Available | - | 1173496 - 1174092 | 23021.1 |
| hypothetical protein | N824_16260 | Not Available | + | 1174282 - 1174374 | 3638.66 |
| hypothetical protein | N824_16265 | Not Available | - | 1174558 - 1175655 | 42806.2 |
| arsr family transcriptional regulator | N824_16270 | Not Available | + | 1175853 - 1176173 | 12740.6 |
| hypothetical protein | N824_16275 | Not Available | + | 1176170 - 1176664 | 18829.2 |
| hypothetical protein | N824_16280 | Not Available | + | 1176702 - 1177223 | 19170.9 |
| hypothetical protein | N824_16285 | Not Available | - | 1177312 - 1178013 | 26885.4 |
| hypothetical protein | N824_16290 | Not Available | - | 1178017 - 1178703 | 25918.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.