Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16195 | Not Available | - | 1164709 - 1164966 | 9987.33 |
| hypothetical protein | N824_16200 | Not Available | + | 1164965 - 1166251 | 47541.1 |
| hypothetical protein | N824_16205 | Not Available | + | 1166386 - 1166562 | 6338.03 |
| hypothetical protein | N824_16210 | Not Available | - | 1166563 - 1167258 | 26410.9 |
| hypothetical protein | N824_16215 | Not Available | - | 1167258 - 1167908 | 22542.7 |
| hypothetical protein | N824_16220 | Not Available | - | 1168007 - 1168609 | 23517.3 |
| hypothetical protein | N824_16225 | Not Available | + | 1168760 - 1169644 | 33420.1 |
| hypothetical protein | N824_16230 | Not Available | + | 1169701 - 1170219 | 20339.9 |
| hypothetical protein | N824_16235 | Not Available | - | 1170358 - 1170810 | 16619.8 |
| hypothetical protein | N824_16240 | Not Available | - | 1170920 - 1172224 | 45527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.