Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16145 | Not Available | + | 1155258 - 1155467 | 8197.9 |
| hypothetical protein | N824_16150 | Not Available | + | 1155506 - 1155994 | 18401.5 |
| hypothetical protein | N824_16155 | Not Available | + | 1156169 - 1156783 | 24167.1 |
| hypothetical protein | N824_16160 | Not Available | + | 1156864 - 1157889 | 38824.6 |
| hypothetical protein | N824_16165 | Not Available | + | 1157855 - 1160608 | 103373.0 |
| hypothetical protein | N824_16170 | Not Available | + | 1160898 - 1161371 | 18207.9 |
| hypothetical protein | N824_16175 | Not Available | - | 1161470 - 1162510 | 39907.6 |
| hypothetical protein | N824_16180 | Not Available | + | 1162972 - 1163334 | 13315.3 |
| hypothetical protein | N824_16185 | Not Available | - | 1163457 - 1163786 | 12785.9 |
| hypothetical protein | N824_16190 | Not Available | - | 1164134 - 1164691 | 20550.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.