Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16095 | Not Available | + | 1147714 - 1149843 | 80925.7 |
| hypothetical protein | N824_16100 | Not Available | - | 1150441 - 1150590 | 5913.27 |
| hypothetical protein | N824_16105 | Not Available | - | 1150671 - 1151357 | 26703.0 |
| hypothetical protein | N824_16110 | Not Available | + | 1151356 - 1151943 | 22773.0 |
| hypothetical protein | N824_16115 | Not Available | + | 1152110 - 1152253 | 5441.31 |
| atpase | N824_16120 | Not Available | + | 1152418 - 1153551 | 42795.8 |
| hypothetical protein | N824_16125 | Not Available | + | 1153977 - 1154450 | 17979.1 |
| hypothetical protein | N824_16130 | Not Available | + | 1154425 - 1154541 | 4201.01 |
| hypothetical protein | N824_16135 | Not Available | - | 1154687 - 1154836 | 5783.15 |
| hypothetical protein | N824_16140 | Not Available | + | 1154936 - 1155130 | 7524.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.