Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_7711 | Not Available | + | 3673085 - 3673198 | 4484.39 |
| carbohydrate-selective porin oprb | OCAR_7712 | P0A3U4 | + | 3673330 - 3675312 | 71106.2 |
| hypothetical protein | OCAR_7713 | Not Available | + | 3676301 - 3676495 | 7318.51 |
| conserved hypothetical protein | OCAR_7714 | Q08082 | - | 3676573 - 3676911 | 13072.0 |
| transposase orfa is5 family element | OCAR_7715 | P50358 | - | 3676959 - 3677351 | 14597.2 |
| hypothetical protein | OCAR_7716 | Not Available | - | 3678283 - 3678549 | 9044.44 |
| zinc transporter zitb | OCAR_7717 | P13512 | - | 3678755 - 3679672 | 32356.2 |
| flagellar basal body rod protein | OCAR_7719 | Q98HE3 | - | 3682484 - 3683215 | 25769.5 |
| iron permease ftr1 | OCAR_7720 | P39595 | + | 3683668 - 3685686 | 72284.5 |
| bile acid:sodium symporter | OCAR_7721 | Not Available | + | 3685683 - 3686318 | 23045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.