Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7691 | Not Available | - | 3655260 - 3655451 | 6661.59 |
| lytic transglycosylase, catalytic | OCAR_7692 | O31608 | + | 3655856 - 3656590 | 26098.9 |
| conjugal transfer protein, trbc | OCAR_7693 | Not Available | + | 3656604 - 3656906 | 10411.8 |
| conjugal transfer protein | OCAR_7694 | Not Available | + | 3656903 - 3657199 | 11165.9 |
| type iv secretion/conjugal transfer atpase, virb4 family | OCAR_7695 | Q9R2W4 | + | 3657209 - 3659620 | 89443.9 |
| conserved hypothetical protein | OCAR_7696 | Not Available | + | 3659617 - 3660513 | 29588.7 |
| conjugal transfer protein | OCAR_7697 | Not Available | + | 3660525 - 3661241 | 24523.0 |
| conserved hypothetical protein | OCAR_7698 | Not Available | + | 3661263 - 3661457 | 6377.86 |
| putative lipoprotein | OCAR_7699 | Not Available | + | 3661454 - 3661648 | 6658.25 |
| trbl/virb6 plasmid conjugal transfer protein | OCAR_7700 | Q9RND2 | + | 3661657 - 3662787 | 40012.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.