Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS09490 | Not Available | + | 2033985 - 2034509 | 17965.8 |
| hypothetical protein | OCA5_RS09495 | Not Available | + | 2034520 - 2034891 | 14177.7 |
| Major capsid protein | OCA5_RS09500 | Not Available | + | 2034945 - 2036060 | 40878.2 |
| Terminase small subunit | OCA5_RS09505 | Not Available | + | 2036331 - 2036699 | 13582.1 |
| hypothetical protein | OCA5_RS09510 | Not Available | + | 2036769 - 2036942 | 6438.78 |
| Tail fiber protein | OCA5_RS09515 | Not Available | + | 2036942 - 2038684 | 58940.1 |
| hypothetical protein | OCA5_RS18785 | Not Available | + | 2038687 - 2039076 | 14528.2 |
| hypothetical protein | OCA5_RS09520 | Not Available | - | 2039081 - 2039614 | 20119.3 |
| Hypothetical protein | OCA5_RS18790 | Not Available | + | 2039781 - 2040164 | 14238.0 |
| Hypothetical protein | OCA5_RS09530 | Not Available | + | 2040161 - 2040559 | 14007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.