Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS19065 | Not Available | + | 104755 - 105144 | 14906.7 |
| sugar transporter | OCA5_RS18215 | Not Available | + | 105435 - 105651 | 8575.99 |
| dmt family transporter | OCA5_RS18220 | Not Available | + | 105651 - 106700 | 37492.2 |
| type iv secretory system conjugative dna transfer family protein | OCA5_RS18225 | Not Available | - | 106909 - 109146 | 82402.6 |
| p-type dna transfer atpase virb11 | OCA5_RS18230 | Not Available | - | 109043 - 110101 | 38990.9 |
| type iv secretion system protein virb10 | OCA5_RS18235 | Not Available | - | 110064 - 111413 | 48123.1 |
| p-type conjugative transfer protein virb9 | OCA5_RS18240 | Not Available | - | 111416 - 112219 | 29690.1 |
| virb8 family protein | OCA5_RS18245 | Not Available | - | 112216 - 112932 | 26632.6 |
| type iv secretion system protein | OCA5_RS18250 | Not Available | - | 112929 - 114059 | 40012.7 |
| hypothetical protein | OCA5_RS18255 | Not Available | - | 114068 - 114262 | 6658.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.