Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | OCA5_RS02775 | Not Available | + | 578870 - 579739 | 30509.1 |
| molybdenum abc transporter atp-binding protein | OCA5_RS02780 | Not Available | - | 579761 - 580426 | 24570.9 |
| molybdate abc transporter permease subunit | OCA5_RS02785 | Not Available | - | 580428 - 581123 | 24687.9 |
| molybdate abc transporter substrate-binding protein | OCA5_RS02790 | Not Available | - | 581142 - 581954 | 28305.9 |
| hypothetical protein | OCA5_RS02795 | Not Available | - | 582205 - 582708 | 17237.9 |
| molybdopterin-binding protein | OCA5_RS02800 | Not Available | - | 582708 - 582917 | 7133.71 |
| penicillin-insensitive murein endopeptidase | OCA5_RS02805 | Not Available | - | 582939 - 583862 | 33916.3 |
| yegp family protein | OCA5_RS02810 | Not Available | - | 584002 - 584184 | 6695.86 |
| hypothetical protein | OCA5_RS02815 | Not Available | - | 584381 - 584782 | 14139.7 |
| translation elongation factor 4 | OCA5_RS02820 | Not Available | - | 584856 - 586661 | 66676.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.