Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trbi/virb10 family protein | OCA5_RS02725 | Not Available | + | 568762 - 569922 | 41307.3 |
| duf2274 domain-containing protein | OCA5_RS02730 | Not Available | + | 569925 - 570158 | 8415.36 |
| hypothetical protein | OCA5_RS02735 | Not Available | - | 570198 - 570491 | 11126.2 |
| tyrosine-type recombinase/integrase | OCA5_RS02740 | Not Available | - | 570596 - 571849 | 47980.7 |
| radc family protein | OCA5_RS02745 | Not Available | - | 571998 - 572615 | 22998.5 |
| type i methionyl aminopeptidase | OCA5_RS02750 | Not Available | - | 572703 - 573530 | 29781.9 |
| mechanosensitive ion channel family protein | OCA5_RS02755 | Not Available | - | 573632 - 574987 | 48821.2 |
| potassium/proton antiporter | OCA5_RS02760 | Not Available | + | 575195 - 576988 | 64161.2 |
| abc transporter atp-binding protein | OCA5_RS02765 | Not Available | - | 576999 - 577784 | 27965.0 |
| feccd family abc transporter permease | OCA5_RS02770 | Not Available | - | 577781 - 578788 | 34000.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.