Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper-binding protein | OCA5_RS02575 | Not Available | + | 536844 - 537146 | 10958.6 |
| fkbm family methyltransferase | OCA5_RS02580 | Not Available | + | 537219 - 538196 | 35988.7 |
| gnat family n-acetyltransferase | OCA5_RS02585 | Not Available | + | 538193 - 538858 | 24148.9 |
| opgc family protein | OCA5_RS02590 | Not Available | + | 539021 - 540175 | 42128.9 |
| duf4396 domain-containing protein | OCA5_RS02595 | Not Available | + | 540324 - 542195 | 68628.4 |
| copper homeostasis periplasmic binding protein copc | OCA5_RS02600 | Not Available | + | 542226 - 542591 | 13033.6 |
| copper homeostasis membrane protein copd | OCA5_RS02605 | Not Available | + | 542591 - 543526 | 33224.1 |
| duf411 domain-containing protein | OCA5_RS02610 | Not Available | + | 543576 - 544049 | 16468.8 |
| acyltransferase family protein | OCA5_RS02615 | Not Available | - | 544081 - 545145 | 39162.7 |
| is3 family transposase | OCA5_RS02620 | Not Available | - | 545166 - 546403 | 46117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.