Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | OCA5_RS02525 | Not Available | + | 525214 - 526134 | 32410.8 |
| duf3363 domain-containing protein | OCA5_RS19435 | Not Available | + | 527273 - 528505 | 45530.0 |
| heavy metal translocating p-type atpase | OCA5_RS02535 | Not Available | - | 528599 - 531046 | 85248.6 |
| metal-sensitive transcriptional regulator | OCA5_RS02540 | Not Available | + | 531100 - 531375 | 10370.7 |
| hypothetical protein | OCA5_RS02545 | Not Available | + | 531376 - 531936 | 20074.8 |
| hypothetical protein | OCA5_RS02550 | Not Available | + | 532016 - 532315 | 10118.2 |
| tolc family protein | OCA5_RS02555 | Not Available | + | 532325 - 533785 | 53464.0 |
| multicopper oxidase family protein | OCA5_RS02560 | Not Available | + | 533797 - 535176 | 50579.2 |
| plastocyanin/azurin family copper-binding protein | OCA5_RS02565 | Not Available | + | 535241 - 535726 | 17681.1 |
| lipid ii:glycine glycyltransferase femx | OCA5_RS02570 | Not Available | + | 535731 - 536831 | 41327.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.