Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator domain-containing protein | OCA5_RS19425 | Not Available | + | 519979 - 520200 | 8957.56 |
| duf2285 domain-containing protein | OCA5_RS19430 | Not Available | + | 520289 - 520759 | 17910.6 |
| duf2285 domain-containing protein | OCA5_RS02485 | Not Available | - | 520768 - 521055 | 10976.8 |
| helix-turn-helix transcriptional regulator | OCA5_RS02490 | Not Available | + | 521512 - 521781 | 9912.9 |
| replication initiator protein a | OCA5_RS02495 | Not Available | + | 521782 - 522852 | 40403.1 |
| para family partition atpase | OCA5_RS02500 | Not Available | + | 522849 - 523502 | 23325.2 |
| hypothetical protein | OCA5_RS02505 | Not Available | + | 523499 - 523750 | 9230.95 |
| duf2840 domain-containing protein | OCA5_RS02510 | Not Available | + | 523747 - 524265 | 19662.6 |
| s26 family signal peptidase | OCA5_RS02515 | Not Available | + | 524262 - 524807 | 19794.9 |
| duf736 domain-containing protein | OCA5_RS02520 | Not Available | + | 524874 - 525209 | 12329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.