Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | OCA5_RS02435 | Not Available | + | 505957 - 509133 | 114436.0 |
| duf411 domain-containing protein | OCA5_RS02440 | Not Available | + | 509330 - 509818 | 17351.3 |
| gdccvxc domain-containing (seleno)protein | OCA5_RS19420 | Not Available | + | 509846 - 510064 | 7802.28 |
| merr family transcriptional regulator | OCA5_RS02445 | Not Available | - | 510073 - 510492 | 15576.7 |
| heavy metal translocating p-type atpase | OCA5_RS02450 | Not Available | + | 510559 - 512697 | 73761.3 |
| parb/repb/spo0j family partition protein | OCA5_RS02455 | Not Available | + | 513131 - 515224 | 76616.6 |
| hypothetical protein | OCA5_RS02460 | Not Available | + | 515439 - 515864 | 14271.2 |
| s41 family peptidase | OCA5_RS02465 | Not Available | + | 516007 - 517008 | 35865.6 |
| duf736 domain-containing protein | OCA5_RS02470 | Not Available | + | 517747 - 518067 | 11543.5 |
| hypothetical protein | OCA5_RS02475 | Not Available | + | 518478 - 519671 | 44279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.