Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | OCA5_RS02340 | Not Available | + | 485930 - 486727 | 28389.8 |
| 2-hydroxyacid dehydrogenase | OCA5_RS02345 | Not Available | + | 486733 - 487713 | 35382.9 |
| apri/inh family metalloprotease inhibitor | OCA5_RS02350 | Not Available | + | 487710 - 488408 | 25510.8 |
| iron abc transporter permease | OCA5_RS18615 | Not Available | - | 488551 - 488715 | 5727.03 |
| hypothetical protein | OCA5_RS02355 | Not Available | + | 489087 - 490007 | 34752.6 |
| aaa domain-containing protein | OCA5_RS02360 | Not Available | + | 490227 - 493517 | 120413.0 |
| phospholipase d-like domain-containing protein | OCA5_RS02365 | Not Available | + | 493514 - 495253 | 64281.2 |
| helix-turn-helix domain-containing protein | OCA5_RS02370 | Not Available | - | 495456 - 495689 | 8531.3 |
| hypothetical protein | OCA5_RS02375 | Not Available | + | 496022 - 496321 | 10950.1 |
| pin domain-containing protein | OCA5_RS02380 | Not Available | + | 496318 - 496764 | 16386.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.