Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| divalent metal ion exporter subunit ihpa | OCA5_RS18100 | Not Available | + | 78351 - 79622 | 45315.3 |
| divalent metal ion exporter adaptor subunit ihpb | OCA5_RS18105 | Not Available | + | 79619 - 80596 | 34882.8 |
| efflux rnd transporter permease subunit | OCA5_RS18110 | Not Available | + | 80689 - 83904 | 115100.0 |
| hypothetical protein | OCA5_RS18115 | Not Available | + | 83901 - 84275 | 12889.6 |
| opgc family protein | OCA5_RS18120 | Not Available | + | 84325 - 85446 | 42003.1 |
| heavy metal translocating p-type atpase | OCA5_RS18125 | Not Available | + | 85595 - 88117 | 88856.2 |
| methyltransferase family protein | OCA5_RS18130 | Not Available | + | 88481 - 89032 | 20368.6 |
| sugar transporter | OCA5_RS18135 | Not Available | - | 89118 - 90034 | 33429.0 |
| cytochrome c/ftr1 family iron permease | OCA5_RS18140 | Not Available | - | 90031 - 92049 | 72284.5 |
| flagellar hook-basal body complex protein | OCA5_RS18145 | Not Available | + | 92502 - 93233 | 25769.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.