Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6496 domain-containing protein | OCA5_RS02285 | Not Available | - | 474579 - 474935 | 13279.5 |
| efflux rnd transporter permease subunit | OCA5_RS02290 | Not Available | + | 475184 - 477556 | 85213.2 |
| hypothetical protein | OCA5_RS02295 | Not Available | - | 477636 - 478142 | 17379.4 |
| voc family protein | OCA5_RS02300 | Not Available | - | 478405 - 478815 | 14655.4 |
| Trna-arg | Not Available | Not Available | + | 478949 - 479025 | Not Available |
| fmn-binding glutamate synthase family protein | OCA5_RS02310 | Not Available | + | 479178 - 480797 | 58626.6 |
| carbohydrate porin | OCA5_RS02315 | Not Available | - | 480864 - 482855 | 72020.7 |
| creatininase family protein | OCA5_RS02325 | Not Available | - | 483199 - 484011 | 29215.0 |
| abc transporter substrate-binding protein | OCA5_RS02330 | Not Available | + | 484120 - 485148 | 37910.4 |
| abc transporter atp-binding protein | OCA5_RS02335 | Not Available | + | 485145 - 485918 | 27931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.