Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | OCA5_RS02185 | Not Available | + | 452595 - 453761 | 40880.1 |
| hlyc/corc family transporter | OCA5_RS02190 | Not Available | + | 453771 - 455081 | 48414.5 |
| bola family protein | OCA5_RS02195 | Not Available | - | 455111 - 455377 | 9634.48 |
| j domain-containing protein | OCA5_RS02200 | Not Available | + | 455546 - 456193 | 24619.2 |
| cobaltochelatase subunit cobs | OCA5_RS02205 | Not Available | + | 456615 - 457610 | 37152.2 |
| cobaltochelatase subunit cobt | OCA5_RS02210 | Not Available | + | 457616 - 459517 | 70459.9 |
| esterase-like activity of phytase family protein | OCA5_RS02215 | Not Available | + | 459526 - 460572 | 37029.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | OCA5_RS02220 | Not Available | + | 460788 - 461804 | 36630.2 |
| tripartite tricarboxylate transporter tctb family protein | OCA5_RS02225 | Not Available | + | 461881 - 462384 | 18257.8 |
| tripartite tricarboxylate transporter permease | OCA5_RS02230 | Not Available | + | 462444 - 463955 | 52617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.