Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | OCA5_RS02085 | Not Available | - | 432835 - 433521 | 24047.1 |
| aspartate kinase | OCA5_RS02090 | Not Available | - | 433574 - 434830 | 44854.4 |
| ph domain-containing protein | OCA5_RS02095 | Not Available | + | 434971 - 435438 | 16961.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | OCA5_RS02100 | Not Available | + | 435454 - 436218 | 27939.6 |
| eama family transporter | OCA5_RS02105 | Not Available | + | 436316 - 437212 | 31393.6 |
| duf1178 family protein | OCA5_RS02110 | Not Available | - | 437273 - 437728 | 17057.3 |
| carbon-nitrogen hydrolase family protein | OCA5_RS02115 | Not Available | - | 437725 - 438606 | 31821.9 |
| glutaredoxin 3 | OCA5_RS02120 | Not Available | - | 438603 - 438878 | 9919.79 |
| comf family protein | OCA5_RS02125 | Not Available | - | 438910 - 439746 | 30337.1 |
| methyltransferase domain-containing protein | OCA5_RS02130 | Not Available | + | 439835 - 440683 | 31099.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.