Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetoacetyl-coa reductase | OCA5_RS02035 | Not Available | + | 421585 - 422310 | 25376.4 |
| dmt family transporter | OCA5_RS02040 | Not Available | + | 422371 - 423255 | 30570.3 |
| amidase | OCA5_RS02045 | Not Available | - | 423285 - 424838 | 54564.3 |
| cupin domain-containing protein | OCA5_RS02050 | Not Available | - | 425143 - 425580 | 15487.3 |
| hydroxyacylglutathione hydrolase | OCA5_RS02055 | Not Available | - | 425580 - 426347 | 28143.0 |
| class i sam-dependent methyltransferase | OCA5_RS02060 | Not Available | + | 426464 - 427207 | 27999.2 |
| duf4167 domain-containing protein | OCA5_RS02065 | Not Available | - | 427236 - 427925 | 25608.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | OCA5_RS02070 | Not Available | - | 428452 - 429324 | 30395.8 |
| peptide chain release factor 1 | OCA5_RS02075 | Not Available | - | 429321 - 430397 | 39302.6 |
| phosphoenolpyruvate--protein phosphotransferase | OCA5_RS02080 | Not Available | - | 430449 - 432716 | 82853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.