Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1345 domain-containing protein | OCA5_RS01985 | Not Available | - | 412504 - 413208 | 25603.5 |
| polyprenyl synthetase family protein | OCA5_RS01990 | Not Available | - | 413216 - 414154 | 33198.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | OCA5_RS01995 | Not Available | + | 414313 - 414999 | 24694.1 |
| 50s ribosomal protein l32 | OCA5_RS02000 | Not Available | + | 415127 - 415312 | 7106.69 |
| hypothetical protein | OCA5_RS02005 | Not Available | + | 415425 - 416114 | 24372.9 |
| hypothetical protein | OCA5_RS02010 | Not Available | - | 416127 - 416279 | 5328.45 |
| bifunctional diguanylate cyclase/phosphodiesterase | OCA5_RS02015 | Not Available | + | 416681 - 418396 | 62677.3 |
| fkbm family methyltransferase | OCA5_RS02020 | Not Available | - | 418425 - 419222 | 28593.2 |
| polyhydroxyalkanoate synthesis repressor phar | OCA5_RS02025 | Not Available | - | 419384 - 419983 | 22990.2 |
| acetyl-coa c-acetyltransferase | OCA5_RS02030 | Not Available | + | 420250 - 421428 | 40892.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.