Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helicase-related protein | OCA5_RS18600 | Not Available | - | 376853 - 379945 | 115691.0 |
| dna cytosine methyltransferase | OCA5_RS01845 | Not Available | + | 380069 - 381757 | 62491.8 |
| hypothetical protein | OCA5_RS01850 | Not Available | - | 381860 - 383815 | 73219.0 |
| hypothetical protein | OCA5_RS01855 | Not Available | - | 383974 - 384189 | 8128.72 |
| tyrosine-type recombinase/integrase | OCA5_RS01860 | Not Available | - | 384890 - 385645 | 28825.2 |
| Trna-arg | Not Available | Not Available | + | 386015 - 386091 | Not Available |
| yccf domain-containing protein | OCA5_RS01870 | Not Available | - | 386143 - 386547 | 14356.4 |
| ada metal-binding domain-containing protein | OCA5_RS01875 | Not Available | - | 386602 - 386868 | 9659.55 |
| nadh:flavin oxidoreductase/nadh oxidase | OCA5_RS01880 | Not Available | - | 386913 - 388013 | 39408.7 |
| mbl fold metallo-hydrolase | OCA5_RS01885 | Not Available | - | 388130 - 388801 | 23729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.