Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | OCA5_RS01785 | Not Available | + | 364080 - 365783 | 63013.9 |
| hypothetical protein | OCA5_RS01790 | Not Available | + | 365795 - 366304 | 19281.9 |
| abc-three component system protein | OCA5_RS01795 | Not Available | + | 366315 - 367532 | 45268.8 |
| three component abc system middle component | OCA5_RS01800 | Not Available | + | 367529 - 368014 | 17265.8 |
| duf3732 domain-containing protein | OCA5_RS01805 | Not Available | + | 368011 - 369969 | 72504.3 |
| hypothetical protein | OCA5_RS01810 | Not Available | + | 370337 - 371515 | 45152.1 |
| Trna-arg | Not Available | Not Available | + | 371624 - 371700 | Not Available |
| rna polymerase sigma factor rpod/siga | OCA5_RS01825 | Not Available | + | 372374 - 373540 | 44999.8 |
| nuclease-related domain-containing dead/deah box helicase | OCA5_RS18590 | Not Available | + | 373540 - 375147 | 59429.9 |
| hypothetical protein | OCA5_RS01835 | Not Available | - | 375150 - 376136 | 35737.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.