Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | OCA5_RS01685 | Not Available | - | 342327 - 345032 | 98111.9 |
| potassium-transporting atpase subunit kdpc | OCA5_RS01690 | Not Available | - | 345089 - 345664 | 20114.2 |
| potassium-transporting atpase subunit kdpb | OCA5_RS01695 | Not Available | - | 345740 - 347809 | 72095.7 |
| potassium-transporting atpase subunit kdpa | OCA5_RS01700 | Not Available | - | 348037 - 349734 | 58925.9 |
| k(+)-transporting atpase subunit f | OCA5_RS18585 | Not Available | - | 349765 - 349854 | 3325.15 |
| hypothetical protein | OCA5_RS01705 | Not Available | - | 350340 - 350588 | 9047.69 |
| hypothetical protein | OCA5_RS01710 | Not Available | - | 350642 - 350836 | 6851.44 |
| iron abc transporter permease | OCA5_RS01715 | Not Available | - | 351019 - 351966 | 33388.4 |
| hypothetical protein | OCA5_RS01720 | Not Available | - | 351963 - 352427 | 17876.5 |
| hypothetical protein | OCA5_RS19240 | Not Available | - | 352587 - 352736 | 5018.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.